Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323480 bp
Thymine Count
1323151 bp
Guanine Count
1343978 bp
Cytosine Count
1355931 bp
Genome Length
5356205 bp
Protein-coding Genes
4784 genes
Non-Coding Genes
444 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | C9182_18190 | Not Available | Positive | 3678377 - 3679234 | 31568.7 |
| fusc family protein | C9182_18195 | Not Available | Positive | 3679234 - 3681246 | 75185.9 |
| superoxide dismutase | C9182_18200 | Not Available | Negative | 3681247 - 3681768 | 17682.0 |
| oxidoreductase | C9182_18205 | Not Available | Negative | 3681849 - 3682745 | 33677.6 |
| xanthosine permease | C9182_18210 | Not Available | Positive | 3682915 - 3684171 | 46082.4 |
| xapx domain-containing protein | C9182_18215 | Not Available | Positive | 3684224 - 3684382 | 5691.39 |
| lysr family transcriptional regulator | C9182_18220 | Not Available | Positive | 3684423 - 3685307 | 33629.4 |
| Trna-lys | Not Available | Not Available | Positive | 3685416 - 3685491 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 3685496 - 3685571 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 3685618 - 3685693 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





