Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323480 bp
Thymine Count
1323151 bp
Guanine Count
1343978 bp
Cytosine Count
1355931 bp
Genome Length
5356205 bp
Protein-coding Genes
4784 genes
Non-Coding Genes
444 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator hdfr | C9182_16935 | Not Available | Positive | 3451374 - 3452213 | 31714.0 |
| Trna-trp | Not Available | Not Available | Positive | 3452309 - 3452384 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 3452393 - 3452469 | Not Available |
| duf4329 domain-containing protein | C9182_16950 | Not Available | Positive | 3452591 - 3453209 | 23275.0 |
| yiix family permuted papain-like enzyme | C9182_16960 | Not Available | Negative | 3454441 - 3455049 | 23138.9 |
| met repressor | C9182_16965 | Not Available | Negative | 3455233 - 3455550 | 12141.4 |
| cystathionine gamma-synthase | C9182_16970 | Not Available | Positive | 3455827 - 3456987 | 41582.9 |
| bifunctional aspartate kinase/homoserine dehydrogenase ii | C9182_16975 | Not Available | Positive | 3456990 - 3459422 | 88892.8 |
| methylenetetrahydrofolate reductase | C9182_16980 | Not Available | Positive | 3459771 - 3460661 | 33104.5 |
| catalase/peroxidase hpi | C9182_16985 | Not Available | Positive | 3460990 - 3463170 | 80008.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





