Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323480 bp
Thymine Count
1323151 bp
Guanine Count
1343978 bp
Cytosine Count
1355931 bp
Genome Length
5356205 bp
Protein-coding Genes
4784 genes
Non-Coding Genes
444 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase iron-sulfur subunit | C9182_16380 | Not Available | Negative | 3338730 - 3339446 | 26785.4 |
| succinate dehydrogenase flavoprotein subunit | C9182_16385 | Not Available | Negative | 3339462 - 3341228 | 64425.6 |
| succinate dehydrogenase hydrophobic membrane anchor subunit | C9182_16390 | Not Available | Negative | 3341228 - 3341575 | 12868.3 |
| succinate dehydrogenase cytochrome b556 subunit | C9182_16395 | Not Available | Negative | 3341569 - 3341958 | 14314.1 |
| hypothetical protein | C9182_16400 | Not Available | Positive | 3342354 - 3342461 | 3827.66 |
| citrate (si)-synthase | C9182_16405 | Not Available | Positive | 3342667 - 3343950 | 48017.7 |
| type 1 fimbrial protein | C9182_16410 | Not Available | Positive | 3344342 - 3344908 | 19855.1 |
| fimbrial biogenesis outer membrane usher protein | C9182_16415 | Not Available | Positive | 3344968 - 3347418 | 90255.5 |
| molecular chaperone | C9182_16420 | Not Available | Positive | 3347433 - 3348164 | 27199.9 |
| type 1 fimbrial protein | C9182_16425 | Not Available | Positive | 3348161 - 3349222 | 39542.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





