Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323480 bp
Thymine Count
1323151 bp
Guanine Count
1343978 bp
Cytosine Count
1355931 bp
Genome Length
5356205 bp
Protein-coding Genes
4784 genes
Non-Coding Genes
444 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9182_15720 | Not Available | Negative | 3206592 - 3207341 | 27664.3 |
| hth-type transcriptional regulator yidz | C9182_15725 | Not Available | Negative | 3207498 - 3208457 | 36903.9 |
| multidrug efflux mfs transporter mdtl | C9182_15730 | Not Available | Negative | 3208432 - 3209607 | 41508.2 |
| low affinity tryptophan permease tnab | C9182_15735 | Not Available | Negative | 3209739 - 3210986 | 45227.3 |
| tryptophanase | C9182_15740 | Not Available | Negative | 3211077 - 3212492 | 52804.5 |
| tryptophanase leader peptide | C9182_15745 | Not Available | Negative | 3212713 - 3212787 | 2894.56 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | C9182_15750 | Not Available | Negative | 3213030 - 3214394 | 49247.8 |
| membrane protein insertase yidc | C9182_15755 | Not Available | Negative | 3214500 - 3216146 | 61529.4 |
| membrane protein insertion efficiency factor yidd | C9182_15760 | Not Available | Negative | 3216149 - 3216406 | 9381.61 |
| ribonuclease p protein component | C9182_15765 | Not Available | Negative | 3216370 - 3216729 | 13790.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





