Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323480 bp
Thymine Count
1323151 bp
Guanine Count
1343978 bp
Cytosine Count
1355931 bp
Genome Length
5356205 bp
Protein-coding Genes
4784 genes
Non-Coding Genes
444 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide transport atp-binding protein dppd | C9182_13520 | Not Available | Positive | 2763343 - 2764326 | 35846.5 |
| dipeptide transport atp-binding protein dppf | C9182_13525 | Not Available | Positive | 2764323 - 2765327 | 37562.7 |
| transporter | C9182_13530 | Not Available | Negative | 2765357 - 2766628 | 47292.4 |
| type i toxin-antitoxin system toxin ldr family protein | C9182_13540 | Not Available | Positive | 2767104 - 2767211 | 3882.93 |
| type i toxin-antitoxin system toxin ldr family protein | C9182_13550 | Not Available | Positive | 2767587 - 2767681 | 3356.26 |
| duf2300 domain-containing protein | C9182_13785 | Not Available | Negative | 2798773 - 2800422 | 61479.2 |
| alpha-2-macroglobulin family protein | C9182_13790 | Not Available | Negative | 2800423 - 2804817 | 162440.0 |
| duf1175 domain-containing protein | C9182_13795 | Not Available | Negative | 2804961 - 2805584 | 23730.5 |
| duf2138 domain-containing protein | C9182_13800 | Not Available | Negative | 2805581 - 2807269 | 62584.7 |
| dna gyrase subunit a | C9182_13805 | Not Available | Negative | 2807418 - 2810045 | 96969.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





