Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323480 bp
Thymine Count
1323151 bp
Guanine Count
1343978 bp
Cytosine Count
1355931 bp
Genome Length
5356205 bp
Protein-coding Genes
4784 genes
Non-Coding Genes
444 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose isomerase | C9182_13365 | Not Available | Positive | 2732290 - 2733612 | 49721.7 |
| xylulokinase | C9182_13370 | Not Available | Positive | 2733684 - 2735138 | 52681.4 |
| hypothetical protein | C9182_13375 | Not Available | Positive | 2735307 - 2735648 | 12553.0 |
| yiab family inner membrane protein | C9182_13380 | Not Available | Positive | 2735694 - 2736131 | 16153.7 |
| acyltransferase | C9182_13385 | Not Available | Negative | 2736173 - 2737168 | 37600.1 |
| hypothetical protein | C9182_13390 | Not Available | Positive | 2737343 - 2737642 | 11324.8 |
| glycine--trna ligase subunit alpha | C9182_13395 | Not Available | Positive | 2737737 - 2738648 | 34718.2 |
| glycine--trna ligase subunit beta | C9182_13400 | Not Available | Positive | 2738658 - 2740727 | 76801.2 |
| type i toxin-antitoxin system toxin hoka | C9182_13405 | Not Available | Positive | 2741053 - 2741205 | 5912.47 |
| cold-shock protein | C9182_13410 | Not Available | Negative | 2741393 - 2741605 | 7403.66 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





