Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323480 bp
Thymine Count
1323151 bp
Guanine Count
1343978 bp
Cytosine Count
1355931 bp
Genome Length
5356205 bp
Protein-coding Genes
4784 genes
Non-Coding Genes
444 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3302 domain-containing protein | C9182_13210 | Not Available | Positive | 2698398 - 2698760 | 13812.7 |
| hlyd family secretion protein | C9182_13215 | Not Available | Positive | 2698763 - 2699899 | 41990.8 |
| glutathione s-transferase | C9182_13220 | Not Available | Positive | 2699970 - 2700578 | 22546.3 |
| l-seryl-trna(sec) selenium transferase | C9182_13225 | Not Available | Positive | 2700676 - 2702067 | 50610.2 |
| selenocysteinyl-trna-specific translation elongation factor selb | C9182_13230 | Not Available | Positive | 2702064 - 2703908 | 68851.5 |
| l-threonine dehydrogenase | C9182_13235 | Not Available | Positive | 2704098 - 2705249 | 40342.6 |
| aldehyde dehydrogenase | C9182_13240 | Not Available | Positive | 2705414 - 2706952 | 56339.5 |
| hypothetical protein | C9182_13245 | Not Available | Negative | 2707055 - 2707255 | 7439.76 |
| type ii toxin-antitoxin system hicb family antitoxin | C9182_13255 | Not Available | Positive | 2707431 - 2707841 | 15213.9 |
| glycoside hydrolase family 127 protein | C9182_13260 | Not Available | Negative | 2707913 - 2709877 | 74877.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





