Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323480 bp
Thymine Count
1323151 bp
Guanine Count
1343978 bp
Cytosine Count
1355931 bp
Genome Length
5356205 bp
Protein-coding Genes
4784 genes
Non-Coding Genes
444 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asma family protein | C9182_12910 | Not Available | Negative | 2634516 - 2636225 | 62273.9 |
| xanthine permease xanp | C9182_12915 | Not Available | Negative | 2636346 - 2637737 | 48871.2 |
| sodium/glutamate symport carrier protein | C9182_12920 | Not Available | Positive | 2638017 - 2639222 | 42445.9 |
| hypothetical protein | C9182_12925 | Not Available | Positive | 2639225 - 2640091 | 33220.7 |
| atp-dependent dna helicase recg | C9182_12930 | Not Available | Negative | 2640076 - 2642157 | 76515.2 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | C9182_12935 | Not Available | Negative | 2642163 - 2642852 | 25344.6 |
| bifunctional (p)ppgpp synthetase ii/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | C9182_12940 | Not Available | Negative | 2642859 - 2644967 | 79347.1 |
| dna-directed rna polymerase subunit omega | C9182_12945 | Not Available | Negative | 2644986 - 2645261 | 10237.2 |
| guanylate kinase | C9182_12950 | Not Available | Negative | 2645316 - 2645939 | 23594.1 |
| nad-dependent dna ligase ligb | C9182_12955 | Not Available | Positive | 2646197 - 2647879 | 63297.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





