Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323480 bp
Thymine Count
1323151 bp
Guanine Count
1343978 bp
Cytosine Count
1355931 bp
Genome Length
5356205 bp
Protein-coding Genes
4784 genes
Non-Coding Genes
444 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic c4-dicarboxylate transporter dcuc | C9182_12600 | Not Available | Positive | 2561762 - 2563147 | 48415.3 |
| two-component response regulator | C9182_12605 | Not Available | Negative | 2563188 - 2563868 | 25454.9 |
| sensor histidine kinase dpib | C9182_12610 | Not Available | Negative | 2563837 - 2565495 | 61659.7 |
| [citrate (pro-3s)-lyase] ligase | C9182_12615 | Not Available | Positive | 2565875 - 2566933 | 40079.5 |
| citrate lyase acyl carrier protein | C9182_12620 | Not Available | Positive | 2566948 - 2567244 | 10689.9 |
| citrate lyase subunit beta | C9182_12625 | Not Available | Positive | 2567241 - 2568149 | 33111.6 |
| citrate lyase subunit alpha | C9182_12630 | Not Available | Positive | 2568160 - 2569692 | 55194.0 |
| apo-citrate lyase phosphoribosyl-dephospho-coa transferase | C9182_12635 | Not Available | Positive | 2569696 - 2570247 | 20271.5 |
| 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme- a synthase | C9182_12640 | Not Available | Positive | 2570222 - 2571100 | 31646.4 |
| anion permease | C9182_12645 | Not Available | Positive | 2571151 - 2572614 | 53095.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





