Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0405 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4910 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trk system potassium uptake protein trkh | C9180_17685 | Not Available | Positive | 3689233 - 3690684 | 52962.9 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | C9180_17690 | Not Available | Positive | 3690696 - 3691241 | 21227.4 |
| hypothetical protein | C9180_17695 | Not Available | Positive | 3691503 - 3692170 | 23534.2 |
| rhs repeat protein | C9180_17700 | Not Available | Positive | 3692246 - 3696460 | 156939.0 |
| sel1 repeat family protein | C9180_17705 | Not Available | Positive | 3696529 - 3697092 | 20997.1 |
| hypothetical protein | C9180_17710 | Not Available | Positive | 3697440 - 3697730 | 11349.5 |
| isas1 family transposase | C9180_17715 | Not Available | Positive | 3697838 - 3698974 | 43079.9 |
| duf1722 domain-containing protein | C9180_17720 | Not Available | Positive | 3699123 - 3699632 | 20287.5 |
| deoxyribodipyrimidine photo-lyase | C9180_17725 | Not Available | Positive | 3699629 - 3701047 | 53662.9 |
| dipeptide permease d | C9180_17730 | Not Available | Negative | 3701197 - 3702678 | 54233.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





