Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0405 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4910 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee translocon filament protein espa | C9180_12070 | Not Available | Negative | 2561485 - 2562063 | 20575.2 |
| type iii secretion system lee gatekeeper sepl | C9180_12075 | Not Available | Negative | 2562122 - 2563177 | 39954.0 |
| type iii secretion system lee inner membrane ring protein escd | C9180_12080 | Not Available | Positive | 2563320 - 2564540 | 45261.8 |
| intimin type gamma | C9180_12085 | Not Available | Negative | 2564804 - 2567608 | 101841.0 |
| type iii secretion system lee chaperone cest | C9180_12090 | Not Available | Negative | 2567668 - 2568138 | 17681.9 |
| type iii secretion system lee translocated intimin receptor tir | C9180_12095 | Not Available | Negative | 2568276 - 2569952 | 58025.8 |
| type iii secretion system lee effector map (rho guanine exchange factor) | C9180_12100 | Not Available | Negative | 2570376 - 2570987 | 22925.3 |
| type iii secretion system lee chaperone cesf | C9180_12105 | Not Available | Positive | 2571253 - 2571636 | 14687.5 |
| type iii secretion system lee effector esph | C9180_12110 | Not Available | Negative | 2571834 - 2572340 | 19283.0 |
| type iii secretion system lee ring protein escq | C9180_12115 | Not Available | Negative | 2572371 - 2573288 | 34894.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





