Escherichia coli strain FWSEC0401

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0401 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism. It typically exists in pairs or as single cells and possesses flagella, which confer mobility. This strain is mesophilic, with an optimal growth temperature of 37°C, making it well-suited for survival in various host environments. FWSEC0401 is associated with a wide range of hosts, including Homo sapiens (humans), Gallus gallus (chickens), Bos taurus (cattle), and many others across multiple taxa, including mammals, birds, and plants. This broad host range indicates its ecological versatility and adaptability to different biological environments. The strain is known for its pathogenicity in humans, being linked to numerous health issues, particularly urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). These health effects highlight the strain's significance as a public health concern, as it is implicated in both foodborne and opportunistic infections. FWSEC0401's ability to engage in free-living biotic relationships further enhances its ecological role, allowing it to thrive in diverse environments. Its pathogenic potential, combined with its capacity to colonize various host organisms, underscores the importance of monitoring this strain in clinical and agricultural settings, particularly regarding food safety and health risks associated with zoonotic transmission.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0401

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0401
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0401 plasmid unnamed4

Gene Summary

Adenine Count

1252793 bp

Thymine Count

1257461 bp

Guanine Count

1283415 bp

Cytosine Count

1293999 bp

Genome Length

5094673 bp

Protein-coding Genes

4590 genes

Non-Coding Genes

313 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinC9176_15400Not AvailablePositive3223519 - 322421125431.5
hypotheticalC9176_15405Not AvailablePositive3224217 - 32244167528.28
Hypothetical proteinC9176_15410Not AvailablePositive3224614 - 32247966787.06
Hypothetical proteinC9176_15415Not AvailablePositive3224802 - 322538321757.0
Winged helix-turn-helix transcriptional regulatorC9176_15420Not AvailablePositive3225395 - 32256499560.58
Hypothetical proteinC9176_15425Not AvailablePositive3225639 - 322590510081.3
Hypothetical proteinC9176_15430Not AvailablePositive3225910 - 322639818344.5
Hypothetical proteinC9176_15435Not AvailablePositive3226483 - 32267259517.6
Hypothetical proteinC9176_15440Not AvailablePositive3226729 - 32268635475.57
Putative excisionaseC9176_15445Not AvailablePositive3226882 - 32271369718.59

Displaying genes 81 – 90 of 4904 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total