Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0401 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252793 bp
Thymine Count
1257461 bp
Guanine Count
1283415 bp
Cytosine Count
1293999 bp
Genome Length
5094673 bp
Protein-coding Genes
4590 genes
Non-Coding Genes
313 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| valine--pyruvate transaminase | C9176_14530 | Not Available | Negative | 3042165 - 3043418 | 46689.9 |
| alpha-amylase | C9176_14535 | Not Available | Negative | 3043596 - 3045626 | 75731.6 |
| protein bax | C9176_14540 | Not Available | Positive | 3045946 - 3046770 | 30869.3 |
| xylr family transcriptional regulator | C9176_14545 | Not Available | Negative | 3046878 - 3048056 | 44871.7 |
| xylose abc transporter permease | C9176_14550 | Not Available | Negative | 3048134 - 3049315 | 41033.5 |
| d-xylose abc transporter atp-binding protein | C9176_14555 | Not Available | Negative | 3049293 - 3050834 | 56518.0 |
| d-xylose abc transporter substrate-binding protein | C9176_14560 | Not Available | Negative | 3050912 - 3051904 | 35722.1 |
| xylose isomerase | C9176_14565 | Not Available | Positive | 3052270 - 3053592 | 49721.7 |
| xylulokinase | C9176_14570 | Not Available | Positive | 3053664 - 3055118 | 52681.4 |
| hypothetical protein | C9176_14575 | Not Available | Positive | 3055287 - 3055628 | 12553.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





