Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0401 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252793 bp
Thymine Count
1257461 bp
Guanine Count
1283415 bp
Cytosine Count
1293999 bp
Genome Length
5094673 bp
Protein-coding Genes
4590 genes
Non-Coding Genes
313 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system tube protein hcp | C9176_13875 | Not Available | Positive | 2904790 - 2904948 | 5680.47 |
| amino acid abc transporter atp-binding protein | C9176_13880 | Not Available | Negative | 2905251 - 2906009 | 28564.0 |
| amino acid abc transporter permease | C9176_13885 | Not Available | Negative | 2906017 - 2907120 | 41512.7 |
| amino acid abc transporter permease | C9176_13890 | Not Available | Negative | 2907130 - 2908311 | 43263.9 |
| amino acid abc transporter substrate-binding protein | C9176_13895 | Not Available | Negative | 2908379 - 2909404 | 37006.8 |
| hypothetical protein | C9176_13900 | Not Available | Negative | 2909835 - 2910056 | 7452.14 |
| multidrug efflux rnd transporter permease subunit acrf | C9176_13905 | Not Available | Negative | 2910309 - 2913413 | 111503.0 |
| multidrug efflux rnd transporter periplasmic adaptor subunit acre | C9176_13910 | Not Available | Negative | 2913425 - 2914582 | 41350.0 |
| multidrug efflux transporter transcriptional repressor acrs | C9176_13915 | Not Available | Positive | 2914981 - 2915643 | 25198.7 |
| duf2556 domain-containing protein | C9176_13920 | Not Available | Negative | 2915646 - 2915825 | 7203.93 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





