Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0401 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252793 bp
Thymine Count
1257461 bp
Guanine Count
1283415 bp
Cytosine Count
1293999 bp
Genome Length
5094673 bp
Protein-coding Genes
4590 genes
Non-Coding Genes
313 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadar family protein | C9176_13220 | Not Available | Negative | 2765008 - 2765490 | 18673.3 |
| atp-dependent dna helicase ding | C9176_13225 | Not Available | Positive | 2765610 - 2767760 | 81426.8 |
| dna-binding protein ybib | C9176_13230 | Not Available | Positive | 2767788 - 2768750 | 35050.7 |
| malate/lactate/ureidoglycolate dehydrogenase | C9176_13235 | Not Available | Positive | 2768891 - 2769976 | 38875.2 |
| duf1471 domain-containing protein | C9176_13240 | Not Available | Negative | 2770204 - 2770464 | 8568.2 |
| dksa/trar family c4-type zinc finger protein | C9176_13245 | Not Available | Negative | 2770729 - 2770995 | 9772.33 |
| fe2+-dependent dioxygenase | C9176_13250 | Not Available | Negative | 2771069 - 2771746 | 25530.2 |
| catecholate siderophore receptor fiu | C9176_13255 | Not Available | Negative | 2771788 - 2774070 | 81960.5 |
| duf1471 domain-containing protein | C9176_13260 | Not Available | Negative | 2774334 - 2774594 | 8896.65 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | C9176_13265 | Not Available | Positive | 2774789 - 2775796 | 37305.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





