Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0401 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1252793 bp
Thymine Count
1257461 bp
Guanine Count
1283415 bp
Cytosine Count
1293999 bp
Genome Length
5094673 bp
Protein-coding Genes
4590 genes
Non-Coding Genes
313 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4156 domain-containing protein | C9176_11310 | Not Available | Positive | 2376594 - 2376947 | 11959.2 |
| transposase family protein | C9176_11315 | Not Available | Negative | 2377074 - 2377256 | 7225.69 |
| hypothetical protein | C9176_11325 | Not Available | Negative | 2377720 - 2377953 | 8870.59 |
| hypothetical protein | C9176_11330 | Not Available | Negative | 2378258 - 2378623 | 14505.3 |
| type iv secretion protein rhs | C9176_11335 | Not Available | Negative | 2378625 - 2379896 | 48120.2 |
| duf1795 domain-containing protein | C9176_11360 | Not Available | Negative | 2383440 - 2383901 | 17319.4 |
| type vi secretion system tip protein vgrg | C9176_11365 | Not Available | Negative | 2383929 - 2385830 | 71385.0 |
| cu(+)/ag(+) sensor histidine kinase cuss | C9176_11370 | Not Available | Negative | 2386567 - 2388015 | 54063.5 |
| copper response regulator transcription factor cusr | C9176_11375 | Not Available | Negative | 2388005 - 2388688 | 25428.2 |
| efflux transporter outer membrane subunit | C9176_11380 | Not Available | Positive | 2388845 - 2390227 | 50714.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





