Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0400 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1200367 bp
Thymine Count
1210061 bp
Guanine Count
1224043 bp
Cytosine Count
1230474 bp
Genome Length
4874470 bp
Protein-coding Genes
4433 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 2-thiouridine(34) synthase mnma | C9175_10855 | Not Available | Negative | 2266764 - 2267870 | 40961.7 |
| nudix hydrolase | C9175_10860 | Not Available | Negative | 2267924 - 2268385 | 17433.8 |
| 23s rrna pseudouridine synthase e | C9175_10865 | Not Available | Negative | 2268395 - 2269048 | 24881.8 |
| nadp-dependent isocitrate dehydrogenase | C9175_10870 | Not Available | Positive | 2269220 - 2270470 | 45772.4 |
| integrase | C9175_10875 | Not Available | Negative | 2270584 - 2270970 | 14596.3 |
| Trna-phe | Not Available | Not Available | Positive | 2271104 - 2271176 | Not Available |
| is3 family transposase | C9175_10880 | Not Available | Negative | 2270955 - 2271115 | 5955.83 |
| duf554 domain-containing protein | C9175_10885 | Not Available | Negative | 2271282 - 2271989 | 24615.5 |
| ornithine decarboxylase | C9175_10890 | Not Available | Positive | 2272387 - 2274522 | 79420.5 |
| nucleoside permease nupg | C9175_10895 | Not Available | Negative | 2274560 - 2275816 | 46392.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





