Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0398 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4342 genes
Non-Coding Genes
200 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein radc | C9173_13770 | Not Available | Positive | 2883025 - 2883501 | 17620.3 |
| duf987 domain-containing protein | C9173_13775 | Not Available | Positive | 2883564 - 2883785 | 8411.2 |
| type iv toxin-antitoxin system yeeu family antitoxin | C9173_13780 | Not Available | Positive | 2883859 - 2884266 | 15216.1 |
| dna-binding transcriptional regulator dsdc | C9173_13785 | Not Available | Negative | 2884462 - 2885397 | 35329.1 |
| d-serine transporter dsdx | C9173_13790 | Not Available | Positive | 2885615 - 2886952 | 47217.2 |
| d-serine ammonia-lyase | C9173_13795 | Not Available | Positive | 2886970 - 2888298 | 47887.3 |
| multidrug efflux mfs transporter permease subunit emry | C9173_13800 | Not Available | Negative | 2888406 - 2889944 | 56004.4 |
| multidrug efflux mfs transporter periplasmic adaptor subunit emrk | C9173_13805 | Not Available | Negative | 2889944 - 2891107 | 42556.8 |
| acid-sensing system dna-binding response regulator evga | C9173_13810 | Not Available | Positive | 2891522 - 2892136 | 22691.5 |
| acid-sensing system histidine kinase evgs | C9173_13815 | Not Available | Positive | 2892141 - 2895734 | 134910.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





