Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0398 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4342 genes
Non-Coding Genes
200 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | C9173_12170 | Not Available | Negative | 2575090 - 2576454 | 49203.8 |
| membrane protein insertase yidc | C9173_12175 | Not Available | Negative | 2576526 - 2578172 | 61529.4 |
| membrane protein insertion efficiency factor yidd | C9173_12180 | Not Available | Negative | 2578175 - 2578432 | 9381.61 |
| ribonuclease p protein component | C9173_12185 | Not Available | Negative | 2578396 - 2578755 | 13790.0 |
| 50s ribosomal protein l34 | C9173_12190 | Not Available | Negative | 2578772 - 2578912 | 5380.74 |
| hypothetical protein | C9173_12195 | Not Available | Negative | 2579142 - 2579222 | 3111.7 |
| chromosomal replication initiator protein dnaa | C9173_12200 | Not Available | Positive | 2579519 - 2580922 | 52553.7 |
| dna polymerase iii subunit beta | C9173_12205 | Not Available | Positive | 2580927 - 2582027 | 40589.1 |
| dna replication/repair protein recf | C9173_12210 | Not Available | Positive | 2582027 - 2583100 | 40516.4 |
| dna gyrase subunit b | C9173_12215 | Not Available | Positive | 2583129 - 2585543 | 89925.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





