Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0398 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4342 genes
Non-Coding Genes
200 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel import atp-binding protein nikd | C9173_11805 | Not Available | Positive | 2494826 - 2495590 | 26849.3 |
| nickel import atp-binding protein nike | C9173_11810 | Not Available | Positive | 2495587 - 2496393 | 29660.3 |
| nickel-responsive transcriptional regulator nikr | C9173_11815 | Not Available | Positive | 2496399 - 2496800 | 15094.7 |
| type ii toxin-antitoxin system hicb family antitoxin | C9173_11820 | Not Available | Negative | 2496920 - 2497279 | 13403.0 |
| type ii toxin-antitoxin system hica family toxin | C9173_11825 | Not Available | Negative | 2497276 - 2497551 | 10186.5 |
| inner membrane transport permease yhhj | C9173_11830 | Not Available | Negative | 2497624 - 2498748 | 41050.2 |
| abc transporter atp-binding protein/permease | C9173_11835 | Not Available | Negative | 2498748 - 2501483 | 100787.0 |
| hlyd family secretion protein | C9173_11840 | Not Available | Negative | 2501480 - 2502547 | 38858.6 |
| duf4049 domain-containing protein | C9173_11845 | Not Available | Negative | 2502913 - 2504535 | 61193.9 |
| duf4049 domain-containing protein | C9173_11850 | Not Available | Negative | 2504797 - 2506386 | 60988.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





