Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0398 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4342 genes
Non-Coding Genes
200 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp pyrophosphate phosphatase | C9173_08630 | Not Available | Positive | 1814660 - 1815370 | 26587.1 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | C9173_08640 | Not Available | Negative | 1815786 - 1816445 | 24862.1 |
| rna polymerase-associated protein rapa | C9173_08645 | Not Available | Negative | 1816457 - 1819363 | 109789.0 |
| dna polymerase ii | C9173_08650 | Not Available | Negative | 1819527 - 1821878 | 90041.6 |
| l-ribulose-5-phosphate 4-epimerase | C9173_08655 | Not Available | Negative | 1821953 - 1822648 | 25504.3 |
| l-arabinose isomerase | C9173_08660 | Not Available | Negative | 1822817 - 1824319 | 56078.1 |
| ribulokinase | C9173_08665 | Not Available | Negative | 1824330 - 1826030 | 61185.7 |
| arabinose operon regulatory protein | C9173_08670 | Not Available | Positive | 1826369 - 1827247 | 33385.8 |
| deda family protein | C9173_08675 | Not Available | Positive | 1827333 - 1828097 | 28243.8 |
| thiamine abc transporter atp-binding protein thiq | C9173_08680 | Not Available | Negative | 1828184 - 1828882 | 25130.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





