Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1307856 bp
Thymine Count
1305726 bp
Guanine Count
1305776 bp
Cytosine Count
1334227 bp
Genome Length
5261935 bp
Protein-coding Genes
4823 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide core heptose(ii) kinase rfay | C9169_18975 | Not Available | Positive | 3978748 - 3979455 | 27495.7 |
| udp-glucose--(galactosyl) lps alpha1,2-glucosyltransferase | C9169_18980 | Not Available | Positive | 3979480 - 3980493 | 40071.9 |
| lipopolysaccharide n-acetylglucosaminyltransferase | C9169_18985 | Not Available | Positive | 3980502 - 3981644 | 43610.0 |
| o-antigen ligase rfal | C9169_18990 | Not Available | Negative | 3981680 - 3982888 | 46101.8 |
| lipopolysaccharide heptosyltransferase rfac | C9169_18995 | Not Available | Negative | 3982885 - 3983877 | 36856.1 |
| adp-heptose--lps heptosyltransferase rfaf | C9169_19000 | Not Available | Negative | 3983881 - 3984927 | 39029.4 |
| adp-glyceromanno-heptose 6-epimerase | C9169_19005 | Not Available | Negative | 3984937 - 3985869 | 34895.0 |
| protein yibb | C9169_19010 | Not Available | Positive | 3986158 - 3987030 | 34034.7 |
| 2-amino-3-ketobutyrate coa ligase | C9169_19015 | Not Available | Positive | 3987305 - 3988501 | 43119.5 |
| l-threonine 3-dehydrogenase | C9169_19020 | Not Available | Positive | 3988511 - 3989536 | 37204.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





