Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1307856 bp
Thymine Count
1305726 bp
Guanine Count
1305776 bp
Cytosine Count
1334227 bp
Genome Length
5261935 bp
Protein-coding Genes
4823 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nif3-like dinuclear metal center hexameric protein | C9169_18765 | Not Available | Negative | 3935837 - 3936580 | 26894.0 |
| dipeptide permease d | C9169_18770 | Not Available | Positive | 3936851 - 3938332 | 54233.2 |
| deoxyribodipyrimidine photo-lyase | C9169_18775 | Not Available | Negative | 3938482 - 3939900 | 53662.9 |
| duf1722 domain-containing protein | C9169_18780 | Not Available | Negative | 3939897 - 3940406 | 20287.5 |
| duf957 domain-containing protein | C9169_18790 | Not Available | Negative | 3941812 - 3942009 | 7384.68 |
| hypothetical protein | C9169_18795 | Not Available | Negative | 3942021 - 3942512 | 18140.8 |
| toxin | C9169_18800 | Not Available | Negative | 3942509 - 3942883 | 14033.9 |
| structural protein | C9169_18805 | Not Available | Negative | 3942973 - 3943137 | 6019.33 |
| duf4102 domain-containing protein | C9169_18815 | Not Available | Negative | 3944449 - 3945630 | 45163.9 |
| Trna-sec(p) | Not Available | Not Available | Positive | 3945830 - 3945920 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





