Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1307856 bp
Thymine Count
1305726 bp
Guanine Count
1305776 bp
Cytosine Count
1334227 bp
Genome Length
5261935 bp
Protein-coding Genes
4823 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | C9169_16895 | Not Available | Negative | 3583396 - 3583719 | 12197.6 |
| hypothetical protein | C9169_16900 | Not Available | Positive | 3583844 - 3584320 | 17626.0 |
| duf1391 domain-containing protein | C9169_16905 | Not Available | Positive | 3584636 - 3584788 | 5576.47 |
| hypothetical protein | C9169_16910 | Not Available | Negative | 3584903 - 3585418 | 19092.1 |
| 3'-5' exoribonuclease | C9169_16915 | Not Available | Positive | 3585551 - 3585940 | 15191.8 |
| excisionase | C9169_16920 | Not Available | Positive | 3586002 - 3586271 | 10185.4 |
| integrase | C9169_16925 | Not Available | Positive | 3586240 - 3587358 | 42695.4 |
| spermidine/putrescine abc transporter permease | C9169_16930 | Not Available | Positive | 3587525 - 3588319 | 29112.7 |
| spermidine/putrescine abc transporter substrate-binding protein potd | C9169_16935 | Not Available | Positive | 3588316 - 3589362 | 38792.9 |
| nad-dependent protein deacylase | C9169_16940 | Not Available | Negative | 3589518 - 3590339 | 30938.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





