Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1307856 bp
Thymine Count
1305726 bp
Guanine Count
1305776 bp
Cytosine Count
1334227 bp
Genome Length
5261935 bp
Protein-coding Genes
4823 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-3' exoribonuclease | C9169_16480 | Not Available | Positive | 3498226 - 3499107 | 32613.8 |
| threonylcarbamoyl-amp synthase | C9169_16485 | Not Available | Positive | 3499104 - 3499724 | 23213.2 |
| duf2207 domain-containing protein | C9169_16490 | Not Available | Positive | 3499752 - 3501335 | 59845.3 |
| 23s rrna pseudouridylate synthase b | C9169_16495 | Not Available | Positive | 3501548 - 3502420 | 32599.3 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | C9169_16500 | Not Available | Negative | 3502460 - 3503050 | 22028.2 |
| ycik family oxidoreductase | C9169_16505 | Not Available | Negative | 3503047 - 3503805 | 27972.6 |
| protease sohb | C9169_16510 | Not Available | Positive | 3504025 - 3505074 | 39384.7 |
| duf2498 family protein | C9169_16515 | Not Available | Negative | 3505110 - 3505361 | 9386.17 |
| dna topoisomerase i | C9169_16520 | Not Available | Positive | 3505741 - 3508338 | 97356.0 |
| hth-type transcriptional regulator cysb | C9169_16525 | Not Available | Positive | 3508548 - 3509522 | 36152.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





