Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1307856 bp
Thymine Count
1305726 bp
Guanine Count
1305776 bp
Cytosine Count
1334227 bp
Genome Length
5261935 bp
Protein-coding Genes
4823 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4186 domain-containing protein | C9169_16025 | Not Available | Positive | 3395302 - 3395661 | 13553.5 |
| diguanylate cyclase | C9169_16030 | Not Available | Positive | 3395800 - 3397218 | 52169.5 |
| altronate oxidoreductase | C9169_16035 | Not Available | Positive | 3397445 - 3398896 | 54811.3 |
| hypothetical protein | C9169_16040 | Not Available | Positive | 3399093 - 3400007 | 34825.0 |
| trans-aconitate 2-methyltransferase | C9169_16045 | Not Available | Negative | 3400011 - 3400769 | 28948.3 |
| autoinducer 2-degrading protein lsrg | C9169_16050 | Not Available | Negative | 3400826 - 3401116 | 11255.4 |
| 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | C9169_16055 | Not Available | Negative | 3401140 - 3402015 | 31896.6 |
| autoinducer 2 abc transporter substrate-binding protein lsrb | C9169_16060 | Not Available | Negative | 3402042 - 3403064 | 36686.9 |
| autoinducer 2 import system permease lsrd | C9169_16065 | Not Available | Negative | 3403076 - 3404068 | 34458.6 |
| autoinducer 2 import system permease lsrc | C9169_16070 | Not Available | Negative | 3404068 - 3405096 | 36368.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





