Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1307856 bp
Thymine Count
1305726 bp
Guanine Count
1305776 bp
Cytosine Count
1334227 bp
Genome Length
5261935 bp
Protein-coding Genes
4823 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative selenium delivery protein ydfz | C9169_15920 | Not Available | Negative | 3376724 - 3376927 | 7276.83 |
| transcriptional regulator | C9169_15925 | Not Available | Negative | 3377104 - 3377790 | 26566.7 |
| bifunctional nadp-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase ydfg | C9169_15930 | Not Available | Negative | 3377879 - 3378625 | 27264.6 |
| peptidyl-dipeptidase dcp | C9169_15935 | Not Available | Positive | 3378762 - 3380807 | 77454.7 |
| 2-oxo-tetronate isomerase | C9169_15940 | Not Available | Negative | 3380852 - 3381370 | 18292.8 |
| ydei family stress tolerance ob fold protein | C9169_15945 | Not Available | Positive | 3381646 - 3382038 | 14133.9 |
| diguanylate cyclase | C9169_15950 | Not Available | Positive | 3382293 - 3383183 | 33984.6 |
| protein mgts | C9169_15955 | Not Available | Negative | 3383402 - 3383497 | 3523.39 |
| transcriptional regulator ftra | C9169_15960 | Not Available | Negative | 3383605 - 3384576 | 36131.5 |
| rhodanese-like domain-containing protein | C9169_15965 | Not Available | Positive | 3384671 - 3385066 | 14557.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





