Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1307856 bp
Thymine Count
1305726 bp
Guanine Count
1305776 bp
Cytosine Count
1334227 bp
Genome Length
5261935 bp
Protein-coding Genes
4823 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine amidotransferase | C9169_15310 | Not Available | Positive | 3254666 - 3255184 | 18859.4 |
| hypothetical protein | C9169_15315 | Not Available | Negative | 3255164 - 3255607 | 16719.2 |
| giy-yig nuclease family protein | C9169_15320 | Not Available | Positive | 3255658 - 3255960 | 11241.6 |
| n-acetyltransferase | C9169_15325 | Not Available | Negative | 3255947 - 3256450 | 18534.8 |
| scp2 domain-containing protein | C9169_15330 | Not Available | Negative | 3256444 - 3256968 | 19673.0 |
| collagenase | C9169_15335 | Not Available | Positive | 3257177 - 3258172 | 37035.2 |
| u32 family peptidase | C9169_15340 | Not Available | Positive | 3258181 - 3259059 | 32523.1 |
| llm class flavin-dependent oxidoreductase | C9169_15345 | Not Available | Positive | 3259140 - 3260147 | 37045.3 |
| tryptophan permease | C9169_15350 | Not Available | Negative | 3260264 - 3261508 | 44423.2 |
| dead/deah box family atp-dependent rna helicase | C9169_15355 | Not Available | Negative | 3261662 - 3263551 | 70580.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





