Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1307856 bp
Thymine Count
1305726 bp
Guanine Count
1305776 bp
Cytosine Count
1334227 bp
Genome Length
5261935 bp
Protein-coding Genes
4823 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fuculokinase | C9169_15210 | Not Available | Positive | 3237617 - 3239035 | 52259.7 |
| l-fucose mutarotase | C9169_15215 | Not Available | Positive | 3239037 - 3239459 | 15474.0 |
| l-fucose operon activator | C9169_15220 | Not Available | Positive | 3239517 - 3240248 | 27349.7 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | C9169_15225 | Not Available | Negative | 3240292 - 3241392 | 41907.5 |
| duf423 domain-containing protein | C9169_15230 | Not Available | Negative | 3241385 - 3241780 | 14334.0 |
| glycine cleavage system transcriptional activator | C9169_15235 | Not Available | Negative | 3241799 - 3242716 | 34403.4 |
| ygdi/ygdr family lipoprotein | C9169_15240 | Not Available | Negative | 3243067 - 3243294 | 8174.67 |
| cysteine desulfurase csda | C9169_15245 | Not Available | Positive | 3243486 - 3244691 | 43255.6 |
| sulfur acceptor protein csde | C9169_15250 | Not Available | Positive | 3244691 - 3245134 | 15941.2 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | C9169_15255 | Not Available | Negative | 3245185 - 3245991 | 28474.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





