Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1307856 bp
Thymine Count
1305726 bp
Guanine Count
1305776 bp
Cytosine Count
1334227 bp
Genome Length
5261935 bp
Protein-coding Genes
4823 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | C9169_13640 | Not Available | Positive | 2903290 - 2903628 | 13251.7 |
| xre family transcriptional regulator | C9169_13645 | Not Available | Positive | 2903618 - 2903908 | 10777.0 |
| outer membrane assembly protein asma | C9169_13650 | Not Available | Negative | 2903961 - 2905814 | 68955.9 |
| dctp deaminase | C9169_13655 | Not Available | Negative | 2905836 - 2906417 | 21252.4 |
| uridine kinase | C9169_13660 | Not Available | Negative | 2906509 - 2907150 | 24354.6 |
| dna-3-methyladenine glycosylase 2 | C9169_13670 | Not Available | Negative | 2910887 - 2911735 | 31373.0 |
| molecular chaperone | C9169_13675 | Not Available | Positive | 2911869 - 2913221 | 49302.0 |
| helix-hairpin-helix domain-containing protein | C9169_13680 | Not Available | Negative | 2913234 - 2915174 | 71181.4 |
| protein phosphatase 2c domain-containing protein | C9169_13685 | Not Available | Negative | 2915171 - 2915932 | 27477.9 |
| vwa domain-containing protein | C9169_13690 | Not Available | Negative | 2915929 - 2916588 | 24144.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





