Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1307856 bp
Thymine Count
1305726 bp
Guanine Count
1305776 bp
Cytosine Count
1334227 bp
Genome Length
5261935 bp
Protein-coding Genes
4823 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee inner membrane ring protein escd | C9169_13215 | Not Available | Negative | 2826577 - 2827797 | 45261.8 |
| type iii secretion system lee gatekeeper sepl | C9169_13220 | Not Available | Positive | 2827940 - 2828995 | 39954.0 |
| type iii secretion system lee translocon filament protein espa | C9169_13225 | Not Available | Positive | 2829054 - 2829632 | 20575.2 |
| type iii secretion system lee translocon pore-forming subunit espd | C9169_13230 | Not Available | Positive | 2829645 - 2830769 | 39085.5 |
| type iii secretion system lee translocon pore-forming subunit espb | C9169_13235 | Not Available | Positive | 2830790 - 2831728 | 32632.4 |
| type iii secretion system lee chaperone cesd2 | C9169_13240 | Not Available | Positive | 2831735 - 2832142 | 15813.8 |
| type iii secretion system lee needle major subunit escf | C9169_13245 | Not Available | Positive | 2832178 - 2832399 | 8127.69 |
| type iii secretion system lee needle protein cochaperone escg | C9169_13250 | Not Available | Positive | 2832405 - 2832683 | 10280.4 |
| secretion protein espf | C9169_13255 | Not Available | Positive | 2832768 - 2833373 | 20452.4 |
| hypothetical protein | C9169_13265 | Not Available | Negative | 2833808 - 2834041 | 8560.37 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





