Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1307856 bp
Thymine Count
1305726 bp
Guanine Count
1305776 bp
Cytosine Count
1334227 bp
Genome Length
5261935 bp
Protein-coding Genes
4823 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee atpase escn | C9169_13165 | Not Available | Positive | 2815737 - 2817077 | 48819.2 |
| type iii secretion protein | C9169_13170 | Not Available | Positive | 2817137 - 2817457 | 12363.7 |
| type iii secretion system lee needle length regulator escp | C9169_13175 | Not Available | Positive | 2817450 - 2817866 | 16548.9 |
| type iii secretion system lee ring protein escq | C9169_13180 | Not Available | Positive | 2817829 - 2818746 | 34894.7 |
| type iii secretion system lee effector esph | C9169_13185 | Not Available | Positive | 2818777 - 2819283 | 19283.0 |
| type iii secretion system lee chaperone cesf | C9169_13190 | Not Available | Negative | 2819481 - 2819864 | 14687.5 |
| type iii secretion system lee effector map (rho guanine exchange factor) | C9169_13195 | Not Available | Positive | 2820130 - 2820741 | 22925.3 |
| type iii secretion system lee translocated intimin receptor tir | C9169_13200 | Not Available | Positive | 2821165 - 2822841 | 58025.8 |
| type iii secretion system lee chaperone cest | C9169_13205 | Not Available | Positive | 2822979 - 2823449 | 17681.9 |
| intimin type gamma | C9169_13210 | Not Available | Positive | 2823509 - 2826313 | 101841.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





