Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1307856 bp
Thymine Count
1305726 bp
Guanine Count
1305776 bp
Cytosine Count
1334227 bp
Genome Length
5261935 bp
Protein-coding Genes
4823 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee grla-binding negative regulator grlr | C9169_13115 | Not Available | Positive | 2808165 - 2808536 | 13929.9 |
| type iii secretion system lee transcriptional regulator grla | C9169_13120 | Not Available | Positive | 2808591 - 2809004 | 16085.4 |
| type iii secretion system lee chaperone cesd | C9169_13125 | Not Available | Negative | 2809388 - 2809843 | 17503.7 |
| type iii secretion system lee outer membrane ring protein escc | C9169_13130 | Not Available | Negative | 2809857 - 2811395 | 56201.9 |
| type iii secretion system lee switch protein sepd | C9169_13135 | Not Available | Negative | 2811395 - 2811850 | 17562.0 |
| type iii secretion system lee inner membrane ring protein escj | C9169_13140 | Not Available | Negative | 2811856 - 2812428 | 20758.1 |
| esci/ysci/hrpb family type iii secretion system inner rod protein | C9169_13145 | Not Available | Negative | 2812431 - 2812808 | 13272.8 |
| type iii secretion system lee cytoprotective effector espz | C9169_13150 | Not Available | Negative | 2812892 - 2813191 | 9656.61 |
| type iii secretion system lee chaperone cesl | C9169_13155 | Not Available | Positive | 2813376 - 2813729 | 13942.8 |
| type iii secretion system lee export apparatus protein escv | C9169_13160 | Not Available | Positive | 2813726 - 2815753 | 75101.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





