Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1307856 bp
Thymine Count
1305726 bp
Guanine Count
1305776 bp
Cytosine Count
1334227 bp
Genome Length
5261935 bp
Protein-coding Genes
4823 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9169_12705 | Not Available | Positive | 2729448 - 2729654 | 8077.2 |
| hypothetical protein | C9169_12710 | Not Available | Positive | 2729635 - 2729769 | 5036.14 |
| type iii effector protein | C9169_12715 | Not Available | Positive | 2729859 - 2732120 | 88379.8 |
| hypothetical protein | C9169_12720 | Not Available | Positive | 2732311 - 2732490 | 6880.65 |
| hypothetical protein | C9169_12725 | Not Available | Negative | 2733105 - 2733776 | 26242.1 |
| type iii effector | C9169_12730 | Not Available | Positive | 2734077 - 2736485 | 93165.8 |
| 6-phosphogluconate phosphatase | C9169_12735 | Not Available | Negative | 2736622 - 2737287 | 24827.9 |
| ncs2 family permease | C9169_12740 | Not Available | Positive | 2737453 - 2738790 | 46829.7 |
| chromate reductase | C9169_12745 | Not Available | Negative | 2738844 - 2739410 | 20376.8 |
| hypothetical protein | C9169_12750 | Not Available | Negative | 2739432 - 2740181 | 27666.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





