Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1307856 bp
Thymine Count
1305726 bp
Guanine Count
1305776 bp
Cytosine Count
1334227 bp
Genome Length
5261935 bp
Protein-coding Genes
4823 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | C9169_12150 | Not Available | Negative | 2624949 - 2625920 | 37378.5 |
| murein dd-endopeptidase mepm | C9169_12155 | Not Available | Negative | 2626040 - 2627362 | 49060.6 |
| zinc abc transporter substrate-binding protein znua | C9169_12160 | Not Available | Negative | 2627378 - 2628310 | 33888.3 |
| mn2+/zn2+abc transporter atp-binding protein | C9169_12165 | Not Available | Positive | 2628389 - 2629144 | 27869.3 |
| zinc abc transporter permease subunit znub | C9169_12170 | Not Available | Positive | 2629141 - 2629926 | 27836.5 |
| holliday junction branch migration dna helicase ruvb | C9169_12175 | Not Available | Negative | 2630172 - 2631182 | 37176.0 |
| holliday junction branch migration protein ruva | C9169_12180 | Not Available | Negative | 2631191 - 2631802 | 22087.0 |
| hypothetical protein | C9169_12185 | Not Available | Negative | 2631941 - 2632006 | 2665.42 |
| yebb family permuted papain-like enzyme | C9169_12190 | Not Available | Positive | 2632077 - 2632679 | 22692.2 |
| crossover junction endodeoxyribonuclease ruvc | C9169_12195 | Not Available | Negative | 2632681 - 2633202 | 18747.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





