Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1307856 bp
Thymine Count
1305726 bp
Guanine Count
1305776 bp
Cytosine Count
1334227 bp
Genome Length
5261935 bp
Protein-coding Genes
4823 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gentisate 1,2-dioxygenase | C9169_11180 | Not Available | Negative | 2412326 - 2413354 | 38481.4 |
| mfs transporter | C9169_11185 | Not Available | Negative | 2413366 - 2414724 | 48462.8 |
| lysr family transcriptional regulator | C9169_11190 | Not Available | Positive | 2414851 - 2415759 | 33802.3 |
| hypothetical protein | C9169_11195 | Not Available | Positive | 2415890 - 2416288 | 14593.6 |
| cidb/lrgb family autolysis modulator | C9169_11200 | Not Available | Positive | 2416285 - 2416980 | 24437.0 |
| cytidine deaminase | C9169_11205 | Not Available | Positive | 2417110 - 2417994 | 31542.6 |
| protein sana | C9169_11210 | Not Available | Positive | 2418144 - 2418863 | 27288.5 |
| duf2542 family protein | C9169_11215 | Not Available | Positive | 2418866 - 2419105 | 9264.61 |
| nad-dependent dihydropyrimidine dehydrogenase subunit pret | C9169_11220 | Not Available | Positive | 2419299 - 2420537 | 44368.2 |
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | C9169_11225 | Not Available | Positive | 2420531 - 2421766 | 45071.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





