Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1307856 bp
Thymine Count
1305726 bp
Guanine Count
1305776 bp
Cytosine Count
1334227 bp
Genome Length
5261935 bp
Protein-coding Genes
4823 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine transporter sstt | C9169_10765 | Not Available | Positive | 2336353 - 2337597 | 43480.4 |
| ygjv family protein | C9169_10770 | Not Available | Negative | 2337602 - 2338153 | 20590.8 |
| altronate dehydratase | C9169_10775 | Not Available | Negative | 2338236 - 2339723 | 54180.3 |
| glucuronate isomerase | C9169_10780 | Not Available | Negative | 2339738 - 2341150 | 53964.1 |
| hexuronate transporter | C9169_10785 | Not Available | Positive | 2341633 - 2342931 | 46895.0 |
| transcriptional regulator exur | C9169_10790 | Not Available | Positive | 2343061 - 2343837 | 29837.3 |
| deda family protein | C9169_10795 | Not Available | Positive | 2344182 - 2344844 | 24587.0 |
| envz/ompr regulon moderator mzra | C9169_10800 | Not Available | Positive | 2344848 - 2345231 | 14164.0 |
| duf1090 domain-containing protein | C9169_10805 | Not Available | Positive | 2345378 - 2345746 | 13906.4 |
| duf883 domain-containing protein | C9169_10810 | Not Available | Positive | 2345784 - 2346089 | 11052.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





