Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1307856 bp
Thymine Count
1305726 bp
Guanine Count
1305776 bp
Cytosine Count
1334227 bp
Genome Length
5261935 bp
Protein-coding Genes
4823 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine decarboxylase | C9169_10235 | Not Available | Negative | 2223242 - 2225377 | 79482.6 |
| duf554 domain-containing protein | C9169_10240 | Not Available | Positive | 2225775 - 2226482 | 24661.6 |
| Trna-phe | Not Available | Not Available | Positive | 2226588 - 2226663 | Not Available |
| duf4102 domain-containing protein | C9169_10250 | Not Available | Positive | 2226861 - 2228126 | 48007.1 |
| is66-like element isec8 family transposase | C9169_10255 | Not Available | Negative | 2228243 - 2229451 | 44778.7 |
| is66 family insertion sequence hypothetical protein | C9169_10265 | Not Available | Positive | 2229713 - 2230063 | 13118.1 |
| bifunctional glutathionylspermidine amidase/synthase | C9169_10290 | Not Available | Negative | 2233793 - 2235652 | 70536.7 |
| glutathione-dependent disulfide-bond oxidoreductase | C9169_10295 | Not Available | Positive | 2235857 - 2236723 | 32393.4 |
| hydrogenase-2 operon protein hybg | C9169_10300 | Not Available | Negative | 2236846 - 2237094 | 8808.67 |
| hydrogenase nickel incorporation protein hybf | C9169_10305 | Not Available | Negative | 2237107 - 2237448 | 12684.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





