Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1307856 bp
Thymine Count
1305726 bp
Guanine Count
1305776 bp
Cytosine Count
1334227 bp
Genome Length
5261935 bp
Protein-coding Genes
4823 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metalloprotease | C9169_10085 | Not Available | Positive | 2197152 - 2197910 | 26844.9 |
| agmatinase | C9169_10090 | Not Available | Negative | 2198116 - 2199036 | 33558.9 |
| lipoprotein | C9169_10095 | Not Available | Negative | 2199172 - 2199903 | 26360.7 |
| biosynthetic arginine decarboxylase | C9169_10100 | Not Available | Negative | 2200049 - 2202025 | 73890.6 |
| virulence promoting factor | C9169_10105 | Not Available | Negative | 2202034 - 2202165 | 4859.08 |
| hypothetical protein | C9169_10110 | Not Available | Positive | 2202301 - 2202516 | 8114.98 |
| duf2684 family protein | C9169_10115 | Not Available | Negative | 2202513 - 2202764 | 9562.84 |
| s-adenosylmethionine synthase | C9169_10120 | Not Available | Positive | 2202820 - 2203974 | 41954.0 |
| sugar porter family mfs transporter | C9169_10125 | Not Available | Positive | 2204411 - 2205805 | 50943.5 |
| sprt family zinc-dependent metalloprotease | C9169_10130 | Not Available | Positive | 2205882 - 2206379 | 19253.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





