Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1307856 bp
Thymine Count
1305726 bp
Guanine Count
1305776 bp
Cytosine Count
1334227 bp
Genome Length
5261935 bp
Protein-coding Genes
4823 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | C9169_09670 | Not Available | Negative | 2107062 - 2108765 | 62797.5 |
| helix-turn-helix domain-containing protein | C9169_09675 | Not Available | Negative | 2108762 - 2109511 | 28295.4 |
| ghot/ortt family toxin | C9169_09680 | Not Available | Negative | 2109857 - 2110036 | 6642.54 |
| Trna-gly | Not Available | Not Available | Positive | 2111942 - 2112015 | Not Available |
| lysm peptidoglycan-binding domain-containing protein | C9169_09695 | Not Available | Negative | 2112094 - 2112849 | 26540.0 |
| xanthine dehydrogenase molybdenum-binding subunit xdha | C9169_09700 | Not Available | Positive | 2113265 - 2115562 | 82712.0 |
| xanthine dehydrogenase fad-binding subunit | C9169_09705 | Not Available | Positive | 2115573 - 2116451 | 31562.6 |
| xanthine dehydrogenase iron sulfur-binding subunit xdhc | C9169_09710 | Not Available | Positive | 2116448 - 2116927 | 16950.8 |
| sigma-54-dependent fis family transcriptional regulator | C9169_09715 | Not Available | Negative | 2116967 - 2118745 | 66094.0 |
| knotted carbamoyltransferase ygew | C9169_09720 | Not Available | Positive | 2119224 - 2120411 | 44057.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





