Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1307856 bp
Thymine Count
1305726 bp
Guanine Count
1305776 bp
Cytosine Count
1334227 bp
Genome Length
5261935 bp
Protein-coding Genes
4823 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9169_09565 | Not Available | Negative | 2092585 - 2092794 | 8094.38 |
| hypothetical protein | C9169_09570 | Not Available | Negative | 2093033 - 2093275 | 9074.3 |
| type iii secretion apparatus protein orga/mxik | C9169_09575 | Not Available | Negative | 2093235 - 2093816 | 22661.7 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | C9169_09580 | Not Available | Negative | 2093832 - 2094566 | 27625.7 |
| hypothetical protein | C9169_09585 | Not Available | Negative | 2094563 - 2094895 | 12216.5 |
| type iii secretion system needle complex protein | C9169_09590 | Not Available | Negative | 2094915 - 2095154 | 9038.44 |
| enterotoxin | C9169_09595 | Not Available | Negative | 2095168 - 2095917 | 29013.4 |
| type iii secretion protein | C9169_09600 | Not Available | Negative | 2095911 - 2096255 | 12572.4 |
| transcriptional regulator | C9169_09605 | Not Available | Positive | 2096606 - 2097106 | 19159.0 |
| invasion protein | C9169_09610 | Not Available | Positive | 2097136 - 2097402 | 10142.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





