Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1307856 bp
Thymine Count
1305726 bp
Guanine Count
1305776 bp
Cytosine Count
1334227 bp
Genome Length
5261935 bp
Protein-coding Genes
4823 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | C9169_09465 | Not Available | Negative | 2074666 - 2075928 | 46224.1 |
| lysr family transcriptional regulator | C9169_09470 | Not Available | Positive | 2076050 - 2076985 | 34466.8 |
| aspartate/glutamate racemase | C9169_09475 | Not Available | Negative | 2076972 - 2077664 | 25309.5 |
| sugar porter family mfs transporter | C9169_09480 | Not Available | Negative | 2077793 - 2079211 | 51687.6 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | C9169_09485 | Not Available | Negative | 2079526 - 2080287 | 27042.7 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | C9169_09490 | Not Available | Negative | 2080317 - 2081153 | 31092.2 |
| acetyl-coa c-acetyltransferase | C9169_09495 | Not Available | Negative | 2081440 - 2082621 | 40988.1 |
| transporter | C9169_09500 | Not Available | Positive | 2082876 - 2084105 | 45101.9 |
| helix-turn-helix transcriptional regulator | C9169_09505 | Not Available | Positive | 2084565 - 2085197 | 24391.3 |
| transcriptional regulator | C9169_09510 | Not Available | Positive | 2085531 - 2086340 | 30788.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





