Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1307856 bp
Thymine Count
1305726 bp
Guanine Count
1305776 bp
Cytosine Count
1334227 bp
Genome Length
5261935 bp
Protein-coding Genes
4823 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tvp38/tmem64 family protein | C9169_08435 | Not Available | Negative | 1863311 - 1864018 | 26132.7 |
| protein ydjy | C9169_08440 | Not Available | Negative | 1864033 - 1864710 | 24215.7 |
| tvp38/tmem64 family protein | C9169_08445 | Not Available | Negative | 1864715 - 1865425 | 26133.8 |
| exodeoxyribonuclease iii | C9169_08450 | Not Available | Negative | 1865592 - 1866398 | 30952.9 |
| succinylornithine aminotransferase | C9169_08455 | Not Available | Positive | 1866844 - 1868064 | 43682.8 |
| arginine n-succinyltransferase | C9169_08460 | Not Available | Positive | 1868061 - 1869095 | 38458.0 |
| succinylglutamate-semialdehyde dehydrogenase | C9169_08465 | Not Available | Positive | 1869092 - 1870570 | 52988.3 |
| n-succinylarginine dihydrolase | C9169_08470 | Not Available | Positive | 1870567 - 1871910 | 49327.5 |
| succinylglutamate desuccinylase | C9169_08475 | Not Available | Positive | 1871903 - 1872871 | 35831.4 |
| atp-independent periplasmic protein-refolding chaperone | C9169_08480 | Not Available | Positive | 1873201 - 1873686 | 18172.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





