Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1307856 bp
Thymine Count
1305726 bp
Guanine Count
1305776 bp
Cytosine Count
1334227 bp
Genome Length
5261935 bp
Protein-coding Genes
4823 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | C9169_06560 | Not Available | Negative | 1451873 - 1452976 | 40366.7 |
| transcriptional regulator nrdr | C9169_06565 | Not Available | Negative | 1452980 - 1453429 | 17229.9 |
| duf3251 domain-containing protein | C9169_06570 | Not Available | Positive | 1453580 - 1454119 | 19603.6 |
| nucleoside-specific channel-forming protein tsx | C9169_06575 | Not Available | Positive | 1454418 - 1455302 | 33590.6 |
| hnh nuclease family protein | C9169_06580 | Not Available | Negative | 1455479 - 1455826 | 13364.7 |
| type ii toxin-antitoxin system rele/pare family toxin | C9169_06585 | Not Available | Negative | 1455914 - 1456195 | 10993.2 |
| type ii toxin-antitoxin system pard family antitoxin | C9169_06590 | Not Available | Negative | 1456188 - 1456430 | 8997.73 |
| hypothetical protein | C9169_06595 | Not Available | Positive | 1456423 - 1456602 | 6991.55 |
| protein translocase subunit secf | C9169_06600 | Not Available | Negative | 1456581 - 1457552 | 35384.6 |
| protein translocase subunit secd | C9169_06605 | Not Available | Negative | 1457563 - 1459410 | 66636.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





