Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0390 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1300810 bp
Thymine Count
1293561 bp
Guanine Count
1313857 bp
Cytosine Count
1330395 bp
Genome Length
5250183 bp
Protein-coding Genes
4835 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein ypjd | C9166_22620 | Not Available | Negative | 4589252 - 4590043 | 29263.9 |
| signal recognition particle protein | C9166_22625 | Not Available | Positive | 4590210 - 4591571 | 49790.5 |
| 30s ribosomal protein s16 | C9166_22630 | Not Available | Positive | 4591708 - 4591956 | 9191.08 |
| ribosome maturation factor rimm | C9166_22635 | Not Available | Positive | 4591975 - 4592523 | 20606.6 |
| trna (guanosine(37)-n1)-methyltransferase trmd | C9166_22640 | Not Available | Positive | 4592554 - 4593321 | 28424.0 |
| 50s ribosomal protein l19 | C9166_22645 | Not Available | Positive | 4593363 - 4593710 | 13134.0 |
| ompa family protein | C9166_22650 | Not Available | Negative | 4593787 - 4594269 | 17259.6 |
| diguanylate cyclase | C9166_22655 | Not Available | Negative | 4594285 - 4595511 | 45992.1 |
| duf4154 domain-containing protein | C9166_22660 | Not Available | Negative | 4595501 - 4596019 | 18979.2 |
| duf2799 domain-containing protein | C9166_22665 | Not Available | Negative | 4596169 - 4596534 | 13204.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





