Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0390 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1300810 bp
Thymine Count
1293561 bp
Guanine Count
1313857 bp
Cytosine Count
1330395 bp
Genome Length
5250183 bp
Protein-coding Genes
4835 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate transporter | C9166_22160 | Not Available | Negative | 4505846 - 4507162 | 47817.2 |
| lipopolysaccharide heptosyltransferase family protein | C9166_22165 | Not Available | Positive | 4507477 - 4508529 | 39481.5 |
| alpha amylase | C9166_22175 | Not Available | Positive | 4515966 - 4516973 | 38156.7 |
| carbon starvation induced protein csid | C9166_22180 | Not Available | Positive | 4517309 - 4518286 | 37388.6 |
| l-2-hydroxyglutarate oxidase | C9166_22185 | Not Available | Positive | 4518306 - 4519574 | 45993.6 |
| nadp-dependent succinate-semialdehyde dehydrogenase i | C9166_22190 | Not Available | Positive | 4519597 - 4521045 | 51757.1 |
| 4-aminobutyrate--2-oxoglutarate transaminase | C9166_22195 | Not Available | Positive | 4521059 - 4522339 | 45749.3 |
| gaba permease | C9166_22200 | Not Available | Positive | 4522577 - 4523977 | 51083.1 |
| transcriptional regulator | C9166_22205 | Not Available | Positive | 4523998 - 4524660 | 24992.3 |
| peptidoglycan-binding protein lysm | C9166_22210 | Not Available | Negative | 4524661 - 4525110 | 16036.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





