Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0390 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1300810 bp
Thymine Count
1293561 bp
Guanine Count
1313857 bp
Cytosine Count
1330395 bp
Genome Length
5250183 bp
Protein-coding Genes
4835 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssk | C9166_21910 | Not Available | Positive | 4460253 - 4461584 | 49910.7 |
| dotu family type iv/vi secretion system protein | C9166_21915 | Not Available | Positive | 4461589 - 4462350 | 29360.7 |
| type vi secretion system-associated protein tago | C9166_21925 | Not Available | Positive | 4465111 - 4465854 | 26442.7 |
| type vi secretion system protein tssa | C9166_21930 | Not Available | Positive | 4465859 - 4467271 | 52362.2 |
| type vi secretion system membrane subunit tssm | C9166_21935 | Not Available | Positive | 4467380 - 4470814 | 130997.0 |
| hypothetical protein | C9166_21940 | Not Available | Positive | 4470825 - 4472177 | 50685.3 |
| hcp family type vi secretion system effector | C9166_21945 | Not Available | Positive | 4472201 - 4472683 | 18000.5 |
| hypothetical protein | C9166_21950 | Not Available | Positive | 4472727 - 4473641 | 33993.4 |
| hypothetical protein | C9166_21955 | Not Available | Positive | 4473651 - 4474130 | 18160.9 |
| hypothetical protein | C9166_21960 | Not Available | Negative | 4474267 - 4475052 | 29575.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





