Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0390 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1300810 bp
Thymine Count
1293561 bp
Guanine Count
1313857 bp
Cytosine Count
1330395 bp
Genome Length
5250183 bp
Protein-coding Genes
4835 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase isoenzymes nickel incorporation protein hypb | C9166_19705 | Not Available | Positive | 4015226 - 4016098 | 31566.8 |
| hydrogenase assembly protein hypc | C9166_19710 | Not Available | Positive | 4016089 - 4016361 | 9732.58 |
| hydrogenase formation protein hypd | C9166_19715 | Not Available | Positive | 4016361 - 4017482 | 41366.7 |
| hydrogenase expression/formation protein hype | C9166_19720 | Not Available | Positive | 4017479 - 4018489 | 35110.6 |
| formate hydrogenlyase transcriptional activator flha | C9166_19725 | Not Available | Positive | 4018563 - 4020641 | 78512.6 |
| nitrous oxide-stimulated promoter family protein | C9166_19730 | Not Available | Negative | 4020678 - 4021031 | 13964.2 |
| hypothetical protein | C9166_19735 | Not Available | Negative | 4021063 - 4021242 | 6742.79 |
| dna mismatch repair protein muts | C9166_19740 | Not Available | Positive | 4021318 - 4023879 | 95324.6 |
| protein-serine/threonine phosphatase | C9166_19745 | Not Available | Positive | 4023985 - 4024641 | 25086.6 |
| deor/glpr transcriptional regulator | C9166_19750 | Not Available | Negative | 4024692 - 4025459 | 27407.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





