Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0390 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1300810 bp
Thymine Count
1293561 bp
Guanine Count
1313857 bp
Cytosine Count
1330395 bp
Genome Length
5250183 bp
Protein-coding Genes
4835 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase maturation protein hych | C9166_19655 | Not Available | Negative | 4007261 - 4007671 | 15465.6 |
| nadh-quinone oxidoreductase subunit nuob | C9166_19660 | Not Available | Negative | 4007668 - 4008435 | 27999.7 |
| 4fe-4s dicluster domain-containing protein | C9166_19665 | Not Available | Negative | 4008435 - 4008977 | 20329.4 |
| formate hydrogenlyase subunit 5 | C9166_19670 | Not Available | Negative | 4008987 - 4010696 | 64970.1 |
| formate hydrogenlyase subunit 4 | C9166_19675 | Not Available | Negative | 4010714 - 4011637 | 33031.4 |
| formate hydrogenlyase subunit 3 | C9166_19680 | Not Available | Negative | 4011640 - 4013466 | 64143.2 |
| formate hydrogenlyase subunit 2 | C9166_19685 | Not Available | Negative | 4013463 - 4014074 | 21888.4 |
| formate hydrogenlyase regulatory protein hyca | C9166_19690 | Not Available | Negative | 4014199 - 4014660 | 17627.9 |
| hypothetical protein | C9166_19695 | Not Available | Negative | 4014748 - 4014966 | 8011.78 |
| protein hypa | C9166_19700 | Not Available | Positive | 4014872 - 4015222 | 13168.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





