Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0390 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1300810 bp
Thymine Count
1293561 bp
Guanine Count
1313857 bp
Cytosine Count
1330395 bp
Genome Length
5250183 bp
Protein-coding Genes
4835 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate/lactate/ureidoglycolate dehydrogenase | C9166_19090 | Not Available | Negative | 3892667 - 3893752 | 38875.2 |
| dna-binding protein ybib | C9166_19095 | Not Available | Negative | 3893893 - 3894855 | 35046.7 |
| atp-dependent dna helicase ding | C9166_19100 | Not Available | Negative | 3894883 - 3897033 | 81472.0 |
| nadar family protein | C9166_19105 | Not Available | Positive | 3897153 - 3897635 | 18673.3 |
| atp-dependent rna helicase rhle | C9166_19110 | Not Available | Negative | 3897867 - 3899231 | 50022.4 |
| dna-binding transcriptional regulator cecr | C9166_19115 | Not Available | Positive | 3899460 - 3900131 | 25018.1 |
| secretion protein hlyd | C9166_19120 | Not Available | Positive | 3900134 - 3901129 | 36286.7 |
| abc transporter atp-binding protein | C9166_19125 | Not Available | Positive | 3901122 - 3902858 | 63177.4 |
| inner membrane transport permease ybhs | C9166_19130 | Not Available | Positive | 3902851 - 3903984 | 42062.4 |
| inner membrane transport permease ybhr | C9166_19135 | Not Available | Positive | 3903995 - 3905101 | 41568.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





